| ncRNA ID | novel_bna_miR789 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrC8:33875605-33875764 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR537657;SRR537857 |
| Length | 20 |
| Mature sequence(if miRNA) | 1 - AGAGUAGGGUUCUUAGCGGA - 20 |
| Stem-loop(if miRNA) |
A -UA AC GU GAG GGGUUCUUAGCGGAAGUUAAGAAACUGUUUCUUAACUUUUAACUUAAAAA UAAGAACCGAUUUUUAAA C ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| C UUC UCCAAGAAUCGCCUUCAAUUCUUUGACAAAGAAUUGAAAAUUGAAUUUUU AUUCUUGGCUAAGAAUUU U A UAC CA AU |
| Stem-loop sequence | AGAGUAGGGUUCUUAGCGGAAGUUAAGAAACUGUUUCUUAACUUUUAACUUAAAAAACUAAGAACCGAUUUUUAAAGUCCUUAUUUAAGAAUCGGUUCUUAACUUUUUAAGUUAAAAGUUAAGAAACAGUUUCUUAACUUCCGCUAAGAACCUCAUCUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013854010.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized protein ycf45-like (LOC106413189), partial mRNA | uncharacterized protein ycf45-like(LOC106413189) | coding protein | psRNATarget | |||||||||
| XM_013861925.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized protein ycf45-like (LOC106421076), mRNA | uncharacterized protein ycf45-like(LOC106421076) | coding protein | psRNATarget |