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BaseInfo

ncRNA ID novel_bna_miR781
Species Brassica napus
Class miRNA
Genome position ChrC7:31847731-31847891 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657;SRR537857;SRR538067
Length 21
Mature sequence(if miRNA) 1 - AGAGUGGGAUUCUUAGCGGAA - 21
Stem-loop(if miRNA) --     -   A              C     -  C             U          GU         AC       AC
  AGAGU GGG UUCUUAGCGGAAUA AAGAA CU GUCUCUUAAUUUU AACUAAAAAA  UAAGAACCG  UCUUAAA  U
  ||||| ||| |||||||||||||| ||||| || ||||||||||||| ||||||||||  |||||||||  |||||||  U
  UCUCA CUC AAGAAUCGCCUUAU UUCUU GA CAGAGAAUUGAAA UUGAUUUUUU  AUUCUUGGC  AGAAUUU  U
AA     A   -              A     A  -             U          UG         CA       AU
Stem-loop sequence AGAGUGGGAUUCUUAGCGGAAUACAAGAACUCGUCUCUUAAUUUUUAACUAAAAAAGUUAAGAACCGACUCUUAAAACUUUUAUUUAAGAACCGGUUCUUAGUUUUUUUAGUUUAAAGUUAAGAGACAGAUUCUUAUAUUCCGCUAAGAACUCAACUCUAA