ncRNA ID | novel_bna_miR781 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC7:31847731-31847891 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657;SRR537857;SRR538067 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGAGUGGGAUUCUUAGCGGAA - 21 |
Stem-loop(if miRNA) |
--     -   A              C     -  C             U          GU         AC       AC   AGAGU GGG UUCUUAGCGGAAUA AAGAA CU GUCUCUUAAUUUU AACUAAAAAA  UAAGAACCG  UCUUAAA  U   ||||| ||| |||||||||||||| ||||| || ||||||||||||| ||||||||||  |||||||||  |||||||  U   UCUCA CUC AAGAAUCGCCUUAU UUCUU GA CAGAGAAUUGAAA UUGAUUUUUU  AUUCUUGGC  AGAAUUU  U AA     A   -              A     A  -             U          UG         CA       AU |
Stem-loop sequence | AGAGUGGGAUUCUUAGCGGAAUACAAGAACUCGUCUCUUAAUUUUUAACUAAAAAAGUUAAGAACCGACUCUUAAAACUUUUAUUUAAGAACCGGUUCUUAGUUUUUUUAGUUUAAAGUUAAGAGACAGAUUCUUAUAUUCCGCUAAGAACUCAACUCUAA |