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BaseInfo

ncRNA ID	novel_bna_miR779
Species	Brassica napus
Class	miRNA
Genome position	ChrC7:2611526-2611659 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	24
Mature sequence(if miRNA)	1 - AAGGAAGUUGGUGAAAUCGUGUGG - 24
Stem-loop(if miRNA)	--AAG              C    -     A          -         --AA    A   -    C      GAAGUUGGUGAAAU GUGU GGGGU AUUGACUAAA UCGAGAGAG    GAGU AAU GAUU C      |||||||||||||| |||| ||||| |||||||||| |||||||||    |||| ||| |||| U      CUUCAACCACUUUA CGCA CCCCA UAACUGGUUU AGCUCUCUC    CUCA UUA CUAA A AUUUA              U    A     A          U         CCUC    A   G    C
Stem-loop sequence	AAGGAAGUUGGUGAAAUCGUGUGGGGUAAUUGACUAAAUCGAGAGAGAAGAGUAAAUGAUUCCUACAAUCGAUUAACUCCUCCCUCUCUCGAUUUUGGUCAAUAACCCCAACGCUAUUUCACCAACUUCAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013855831.1	ncRNA:24   GGUG-UGCUAAAGUGGUUGAAGGAA   1   |=||-||*|*||||||||||||||* targets:345   CUACUACAACUUCACCAACUUCCUC   369 Target Full Sequence	3.0	PREDICTED: Brassica napus presenilin-like protein At1g08700 (LOC106415193), transcript variant X1, mRNA	presenilin-like protein At1g08700(LOC106415193)	coding protein	psRNATarget
XM_013841549.1	ncRNA:24   GGUG-UGCUAAAGUGGUUGAAGGAA   1   |=||-||*|*||||||||||||||* targets:343   CUACUACAACUUCACCAACUUCCUC   367 Target Full Sequence	3.0	PREDICTED: Brassica napus presenilin-like protein At1g08700 (LOC106401110), mRNA	presenilin-like protein At1g08700(LOC106401110)	coding protein	psRNATarget
XM_013855832.1	ncRNA:24   GGUG-UGCUAAAGUGGUUGAAGGAA   1   |=||-||*|*||||||||||||||* targets:345   CUACUACAACUUCACCAACUUCCUC   369 Target Full Sequence	3.0	PREDICTED: Brassica napus presenilin-like protein At1g08700 (LOC106415193), transcript variant X2, mRNA	presenilin-like protein At1g08700(LOC106415193)	coding protein	psRNATarget