ncRNA ID | novel_bna_miR778 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC7:24131089-24131249 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AGGAUGAAGUUCUUAGCGG - 19 |
Stem-loop(if miRNA) |
--  GA            C            C                          AC      C A         UA   AG  UGAAGUUCUUAG GGAAUAUAAGAA CCGUCUCUUAACUUUUAACUAAAAAG  UAAGAA C GUUCUUAAA  A   ||  |||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||| | |||||||||  G   UC  ACUUCAAGAAUC CCUUAUAUUCUU GGCAGAGAAUUGAAAAUUGAUUUUUU  AUUUUU G CAAGAAUUU  A AA  UC            A            A                          CA      A C         UG |
Stem-loop sequence | AGGAUGAAGUUCUUAGCGGAAUAUAAGAACCCGUCUCUUAACUUUUAACUAAAAAGACUAAGAACCAGUUCUUAAAUAAGAGUUUUAAGAACCGAUUUUUAACUUUUUUAGUUAAAAGUUAAGAGACGGAUUCUUAUAUUCCACUAAGAACUUCACUCUAA |