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BaseInfo

ncRNA ID novel_bna_miR774
Species Brassica napus
Class miRNA
Genome position ChrC6:38475367-38475431 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657
Length 22
Mature sequence(if miRNA) 1 - AGGAUGAAGUUUUUAGCGGAAG - 22
Stem-loop(if miRNA) --  GA  AA          G          A
  AG  UG  GUUUUUAGCG AAGUUAAGAA C
  ||  ||  |||||||||| |||||||||| U
  UC  AC  CAAAAAUCGU UUCAAUUCUU A
AA  UC  CA          A          U
Stem-loop sequence AGGAUGAAGUUUUUAGCGGAAGUUAAGAAACUAUUUCUUAACUUAUGCUAAAAACACCACUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013821343.1
ncRNA:22   GAAG-GCGAUUUUUGAAGUAGGA   1
  =|||-|||||||||||||||||*
targets:166   UUUCUCGCUAAAAACUUCAUCCA   188

3.0 PREDICTED: Brassica napus uncharacterized LOC106381442 (LOC106381442), mRNA uncharacterized LOC106381442(LOC106381442) coding protein psRNATarget