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BaseInfo

ncRNA ID	novel_bna_miR770
Species	Brassica napus
Class	miRNA
Genome position	ChrC5:20934486-20934622 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537657
Length	25
Mature sequence(if miRNA)	113 - UUAGCGGAAUAUAAGAAACUGUAUC - 137
Stem-loop(if miRNA)	--                 A    A  U                             A      -   A   UUAGCGGAAUAUAAGAA CUGU UC UAACUUUUAACUAAAAAAACUAAGAACCG CUCUUA AAU A   ||||||||||||||||| |||| || ||||||||||||||||||||||||||||| |||||| |||   AAUCGCCUUAUAUUCUU GGCA AG AUUGAAAAUUGAUUUUUUUGAUUCUUGGC GAGAAU UUG G AG                 A    G  U                             A      C   A
Stem-loop sequence	UUAGCGGAAUAUAAGAAACUGUAUCUUAACUUUUAACUAAAAAAACUAAGAACCGACUCUUAAAUAAGAGUUCUAAGAGACGGUUCUUAGUUUUUUUAGUUAAAAGUUAUGAGACGGAUUCUUAUAUUCCGCUAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013830747.1	ncRNA:25   CUAUGUCAAAGAAUAUAAGGCGAUU   1   |=*||=|*|||||||||||||*||| targets:22   GGGACGGGUUCUUAUAUUCCGAUAA   46 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830748.1	ncRNA:25   CUAUGUCAAAGAAUAUAAGGCGAUU   1   |=*||=|*|||||||||||||*||| targets:22   GGGACGGGUUCUUAUAUUCCGAUAA   46 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013890958.1	ncRNA:25   CUAUGUCAAAGAAUAUAAGGCGAUU   1   ||*||*||*|||||||||*|||||| targets:794   GAGACCGUAUCUUAUAUUACGCUAA   818 Target Full Sequence	2.5	PREDICTED: Brassica napus transcription factor ORG2-like (LOC106449161), mRNA	transcription factor ORG2-like(LOC106449161)	coding protein	psRNATarget