Search result

BaseInfo

ncRNA ID novel_bna_miR761
Species Brassica napus
Class miRNA
Genome position ChrC4:37893760-37893864 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657
Length 21
Mature sequence(if miRNA) 85 - AACGGAAUAUAAGAACUCAUC - 105
Stem-loop(if miRNA) --AA             CU AUC      C      C    U          C
    CGGAAUAUAAGAA  C   UUUUAA UUUUAA UAAA AAGCUAAGAA U
    |||||||||||||  |   |||||| |||||| |||| ||||||||||
    GCCUUAUAUUCUU  G   AGAAUU AAAAUU AUUU UUCGAUUCUU G
AAUC             AG CAA      A      A    -          G
Stem-loop sequence AACGGAAUAUAAGAACUCAUCUUUUAACUUUUAACUAAAUAAGCUAAGAACUGGUUCUUAGCUUUUUAAUUAAAAAUUAAGAAACGGAUUCUUAUAUUCCGCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013888671.1
ncRNA:21   CUACUCAAGAAUAUAAGGCAA   1
  **|||*|||||||||||||||
targets:1256   AUUGAUUUCUUAUAUUCCGUU   1276

1.0 PREDICTED: Brassica napus flavonol synthase/flavanone 3-hydroxylase-like (LOC106446861), mRNA flavonol synthase/flavanone 3-hydroxylase-like(LOC106446861) coding protein psRNATarget