Search result

BaseInfo

ncRNA ID	novel_bna_miR757
Species	Brassica napus
Class	miRNA
Genome position	ChrC4:49745822-49745913 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537657
Length	20
Mature sequence(if miRNA)	73 - AGAUAUAACCGUUACAGUCG - 92
Stem-loop(if miRNA)	-ACA      C      GUC UCGGAAAUUCGUCGGAAUAUACCGA     UGUAAC GUUGUA   G                         C     |||||| ||||||   |                         G     ACAUUG CAAUAU   G                         A GCUG      C      --A AUAAUUAGCCUUACAACAGCCUUCA
Stem-loop sequence	ACAUGUAACCGUUGUAGUCGUCGGAAAUUCGUCGGAAUAUACCGACGAACUUCCGACAACAUUCCGAUUAAUAGAUAUAACCGUUACAGUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013801715.1	ncRNA:20   GCUGACAUUGCCAAUAUAGA   1   *|||*||||*|||||||||| targets:2508   AGACAGUAAGGGUUAUAUCU   2527 Target Full Sequence	2.5	PREDICTED: Brassica napus tetratricopeptide repeat protein 7B-like (LOC106361904), mRNA	tetratricopeptide repeat protein 7B-like(LOC106361904)	coding protein	psRNATarget
XM_013807768.1	ncRNA:20   GCUGACAUUGCCAAUAUAGA   1   *|||*||||*|||||||||| targets:2356   AGACAGUAAGGGUUAUAUCU   2375 Target Full Sequence	2.5	PREDICTED: Brassica napus tetratricopeptide repeat protein 7B-like (LOC106367903), mRNA	tetratricopeptide repeat protein 7B-like(LOC106367903)	coding protein	psRNATarget
XM_013855839.1	ncRNA:20   GCUGACAUUGCCAAUAUAGA   1   *|||*|||||||*||||||| targets:38   AGACGGUAACGGCUAUAUCU   57 Target Full Sequence	2.5	PREDICTED: Brassica napus syntaxin-related protein KNOLLE-like (LOC106415202), mRNA	syntaxin-related protein KNOLLE-like(LOC106415202)	coding protein	psRNATarget