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BaseInfo

ncRNA ID	novel_bna_miR752
Species	Brassica napus
Class	miRNA
Genome position	ChrC3:23593011-23593072 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537657;SRR538225
Length	19
Mature sequence(if miRNA)	1 - GGAGAUAGUUGGGAAUGUG - 19
Stem-loop(if miRNA)	--UAGA      -   C    C UU    - G       UUUAAC AUC CUUC G  GGGG C U       |||||| ||| |||| |  |||| |       GGGUUG UAG GGAG U  UCCC G U GUGUAA      A   A    C UU    A A
Stem-loop sequence	UAGAUUUAACAUCCCUUCCGUUGGGGCGUUAGACCCUUUUCGAGGAGAUAGUUGGGAAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013846207.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||||||||||||||||*|| targets:1079   CACAUUCCCAACUAUCCCC   1097 Target Full Sequence	1.5	PREDICTED: Brassica napus protein TRANSPARENT TESTA 12-like (LOC106405685), transcript variant X1, mRNA	protein TRANSPARENT TESTA 12-like(LOC106405685)	coding protein	psRNATarget
XM_013846208.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||||||||||||||||*|| targets:1069   CACAUUCCCAACUAUCCCC   1087 Target Full Sequence	1.5	PREDICTED: Brassica napus protein TRANSPARENT TESTA 12-like (LOC106405685), transcript variant X2, mRNA	protein TRANSPARENT TESTA 12-like(LOC106405685)	coding protein	psRNATarget
XM_013846209.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||||||||||||||||*|| targets:1080   CACAUUCCCAACUAUCCCC   1098 Target Full Sequence	1.5	PREDICTED: Brassica napus protein TRANSPARENT TESTA 12-like (LOC106405685), transcript variant X3, mRNA	protein TRANSPARENT TESTA 12-like(LOC106405685)	coding protein	psRNATarget
XM_013846212.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||||||||||||||||*|| targets:1080   CACAUUCCCAACUAUCCCC   1098 Target Full Sequence	1.5	PREDICTED: Brassica napus protein TRANSPARENT TESTA 12-like (LOC106405685), transcript variant X6, mRNA	protein TRANSPARENT TESTA 12-like(LOC106405685)	coding protein	psRNATarget
XM_013877684.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||=|||||||||*|||||| targets:83   CAUAUUCCCAACGAUCUCC   101 Target Full Sequence	2.5	PREDICTED: Brassica napus glutamyl-tRNA reductase 1, chloroplastic (LOC106436733), mRNA	glutamyl-tRNA reductase 1, chloroplastic(LOC106436733)	coding protein	psRNATarget
XM_013889266.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||=|||||||||*|||||| targets:62   CAUAUUCCCAACGAUCUCC   80 Target Full Sequence	2.5	PREDICTED: Brassica napus glutamyl-tRNA reductase 1, chloroplastic-like (LOC106447361), mRNA	glutamyl-tRNA reductase 1, chloroplastic-like(LOC106447361)	coding protein	psRNATarget
XM_013834503.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   ||||*||||||||*||||| targets:925   CACAAUCCCAACUCUCUCC   943 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106393846 (LOC106393846), mRNA	uncharacterized LOC106393846(LOC106393846)	coding protein	psRNATarget
XM_013853418.1	ncRNA:19   GUGUAAGGGUUGAUAGAGG   1   |||*||||||||*|||||| targets:703   CACUUUCCCAACAAUCUCC   721 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106412510 (LOC106412510), mRNA	uncharacterized LOC106412510(LOC106412510)	coding protein	psRNATarget