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BaseInfo

ncRNA ID novel_bna_miR747
Species Brassica napus
Class miRNA
Genome position ChrC2:4724282-4724506 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657
Length 27
Mature sequence(if miRNA) 199 - ACUCUAAACCCUAAACCCUAAACCAUC - 225
Stem-loop(if miRNA) --        C       C       A   A  -        A   C       AC         -------------AAA  UAAACUCUAAACCCUAAACCCUAAAAAAAUAACCCUA
  ACUCUAAA CCUAAAC CUAAACC UCA CA CUAAACCC AAA UAUCAAC  UAAACCCUA                AG                                     A
  |||||||| ||||||| ||||||| ||| || |||||||| ||| |||||||  |||||||||                ||
  UGAGAUUU GGAUUUG GAUUUGG AGU GU GAUUUGGG UUU AUAGUUG  AUUUGGGAU                UU                                     A
GU        A       A       A   -  A        A   U       GA         AUAAAAGACUUUAAAC  GGGAUUUGGGAUUUUGGGAUCUCAACUACAAAAUCCC
Stem-loop sequence ACUCUAAACCCUAAACCCUAAACCAUCAACACUAAACCCAAAACUAUCAACACUAAACCCUAAAAAGUAAACUCUAAACCCUAAACCCUAAAAAAAUAACCCUAAACCCUAAAACAUCAACUCUAGGGUUUUAGGGUUUAGGGUUCAAAUUUCAGAAAAUAUAGGGUUUAAGGUUGAUAUUUUAGGGUUUAGAUGUGAAGGUUUAGAGUUUAGGAUUUAGAGUUG