ncRNA ID | novel_bna_miR734 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:43266870-43267012 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657;SRR537857;SRR538067 |
Length | 27 |
Mature sequence(if miRNA) | 1 - CGAGGAUUUUACGUGAAUAACGGUAUC - 27 |
Stem-loop(if miRNA) |
--      U          UA CG                 U      CUAAC    -AAA  C  U     UA   CGAGGA UUUACGUGAA  A  GUAUCAUCGUUAUUUCC CGUAAA     GACA    AC UU CGUCG  A   |||||| ||||||||||  |  ||||||||||||||||| ||||||     ||||    || || |||||   GCUCCU GGAUGCACUU  U  UAUAGUAGCAAUAAAGG GCAUUU     CUGU    UG AA GUAGC  A AU      U          UG AU                 U      ----A    GCAG  U  U     UG |
Stem-loop sequence | CGAGGAUUUUACGUGAAUAACGGUAUCAUCGUUAUUUCCUCGUAAACUAACGACAAAAACCUUUCGUCGUAAAGUCGAUGUAAUGUGACGUGUCAUUUACGUGGAAAUAACGAUGAUAUUAUGUUUCACGUAGGUUCCUCGUA |