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BaseInfo

ncRNA ID ath-miRf10618-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGUCGAGUGAUGUGAUCGAGU - NA
Stem-loop(if miRNA) U    ---A  GG   G A            GG            G G   GAGUGG G   A
 UGGC    AU  GAU A GUCACUCGACCU  GGGUCGAGUGAU U AUC      U GUC A
 ||||    ||  ||| | ||||||||||||  |||||||||||| | |||      | |||
 ACUG    UG  CUA U UAGUGAGCUGGG  UCCAGCUCACUG A UGG      G UAG A
A    GUGG  AG   G G            GG            A G   -----A G   A
Stem-loop sequence UUGGCAAUGGGAUGAAGUCACUCGACCUGGGGGUCGAGUGAUGUGAUCGAGUGGUGGUCAAAAGAUGGAGGUGAAGUCACUCGACCUGGGGGUCGAGUGAUGUGAUCGAGUGGUGGUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  |||||||||||||||||||||
targets:1664   ACUCGAUCACAUCACUCGACC   1684

0.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  |||||||||||||||||||||
targets:627   ACUCGAUCACAUCACUCGACC   647

0.0 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  |||||||||||||||||||||
targets:627   ACUCGAUCACAUCACUCGACC   647

0.0 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183192.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  |||||||||||||||||||||
targets:252   ACUCGAUCACAUCACUCGACC   272

0.0 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  ||||||||||*||||||||||
targets:902   ACUCGAUCACUUCACUCGACC   922

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183194.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  ||||||||||*||||||||||
targets:505   ACUCGAUCACUUCACUCGACC   525

1.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:21   UGAGCUAGUGUAGUGAGCUGG   1
  |||=*|*||||||||||||||
targets:1606   ACUUCACCACAUCACUCGACC   1626

3.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget