ncRNA ID | novel_bna_miR725 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA7:35659241-35659403 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657;SRR538067 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AGGAUGUGGUUCUUAGCGG - 19 |
Stem-loop(if miRNA) |
--  GA  U                   A   C                          AG                  UA   AG  UG GGUUCUUAGCGGAAGUUAA AAA UGUUUCUUAACUUUUAACUAAAAAAA  UAAGAACUGGUUUUUAAA  A   ||  || ||||||||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||  G   UC  AC CCAAGAAUCGCCUUCAAUU UUU ACAAAGAAUUGAAAAUUGAUUUUUUU  AUUCUUGGCCAAGAAUUU  G AA  UC  C                   C   A                          CG                  CA |
Stem-loop sequence | AGGAUGUGGUUCUUAGCGGAAGUUAAAAAACUGUUUCUUAACUUUUAACUAAAAAAAAGUAAGAACUGGUUUUUAAAUAAGGACUUUAAGAACCGGUUCUUAGCUUUUUUUAGUUAAAAGUUAAGAAACAAUUUCUUAACUUCCGCUAAGAACCCCACUCUAA |