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BaseInfo

ncRNA ID novel_bna_miR720
Species Brassica napus
Class miRNA
Genome position ChrA6:7235186-7235236 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657;SRR537857
Length 19
Mature sequence(if miRNA) 1 - AACCAUUGUUUUAGAGGCU - 19
Stem-loop(if miRNA) ---AA    UGU        -  -  AA
     CCAU   UUUAGAGG CU GU  C
     ||||   |||||||| || ||
     GGUA   AGGUCUCU GA CA  U
CGUAC    --U        A  A  CU
Stem-loop sequence AACCAUUGUUUUAGAGGCUGUAACUUCACAAGAUCUCUGGAUAUGGCAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013859851.1
ncRNA:19   UCGGAGAUUUUGUUACCAA   1
  |||=||||||||*||||||
targets:1055   AGCUUCUAAAACUAUGGUU   1073

2.5 PREDICTED: Brassica napus calponin homology domain-containing protein DDB_G0272472-like (LOC106419091), mRNA calponin homology domain-containing protein DDB_G0272472-like(LOC106419091) coding protein psRNATarget