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BaseInfo

ncRNA ID novel_bna_miR713
Species Brassica napus
Class miRNA
Genome position ChrA1:21834922-21835103 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657
Length 21
Mature sequence(if miRNA) 1 - AGGAUAGGGUUCUUAGCGGAA - 21
Stem-loop(if miRNA) --                C                        C         ---------        C         ---     U       C
  AGGAUAGGGUUCUUAG GGAAUAUAAGAACCCGUCUCUUAA UUUUAACUA         AGAACCGG UCUUAAAUA   AGAGA UUAAGAA C
  |||||||||||||||| |||||||||||||||||||||||| |||||||||         |||||||| |||||||||   ||||| |||||||
  UCCUAUCUCAAGAAUC CCUUAUAUUCUUGGGCAGAGAAUU AAAAUUGAU         UCUUGGCC AGAAUUUAU   UUUUU AAUUCUU A
AA                A                        A         UUUUUUGAU        A         CAU     U       G
Stem-loop sequence AGGAUAGGGUUCUUAGCGGAAUAUAAGAACCCGUCUCUUAACUUUUAACUAAGAACCGGCUCUUAAAUAAGAGAUUUAAGAACCAGUUCUUAAUUUUUUUACUAUUUAAGAACCGGUUCUUAGUUUUUUUAGUUAAAAAUUAAGAGACGGGUUCUUAUAUUCCACUAAGAACUCUAUCCUAA