ncRNA ID | novel_bna_miR713 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA1:21834922-21835103 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGGAUAGGGUUCUUAGCGGAA - 21 |
Stem-loop(if miRNA) |
--                C                        C         ---------        C         ---     U       C   AGGAUAGGGUUCUUAG GGAAUAUAAGAACCCGUCUCUUAA UUUUAACUA         AGAACCGG UCUUAAAUA   AGAGA UUAAGAA C   |||||||||||||||| |||||||||||||||||||||||| |||||||||         |||||||| |||||||||   ||||| |||||||   UCCUAUCUCAAGAAUC CCUUAUAUUCUUGGGCAGAGAAUU AAAAUUGAU         UCUUGGCC AGAAUUUAU   UUUUU AAUUCUU A AA                A                        A         UUUUUUGAU        A         CAU     U       G |
Stem-loop sequence | AGGAUAGGGUUCUUAGCGGAAUAUAAGAACCCGUCUCUUAACUUUUAACUAAGAACCGGCUCUUAAAUAAGAGAUUUAAGAACCAGUUCUUAAUUUUUUUACUAUUUAAGAACCGGUUCUUAGUUUUUUUAGUUAAAAAUUAAGAGACGGGUUCUUAUAUUCCACUAAGAACUCUAUCCUAA |