Search result

BaseInfo

ncRNA ID novel_bna_miR712
Species Brassica napus
Class miRNA
Genome position ChrA5:24847882-24847928 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537657
Length 22
Mature sequence(if miRNA) 1 - AACUGAAAAAAUUAAGAACCGG - 22
Stem-loop(if miRNA) --                     
  AACUGAAAAAAUUAAGAACCGG
  |||||||||||||||||||||C
  UUGACUUUUUUGAUUCUUGGCU
AA                     
Stem-loop sequence AACUGAAAAAAUUAAGAACCGGCUCGGUUCUUAGUUUUUUCAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013792502.1
ncRNA:22   GGCCAAGAAUUAAAAAAGUCAA   1
  =|**|||||||||||||*||||
targets:1575   UCUUUUCUUAAUUUUUUAAGUU   1596

2.5 PREDICTED: Brassica napus ethylene-responsive transcription factor WRI1-like (LOC106352859), transcript variant X2, mRNA ethylene-responsive transcription factor WRI1-like(LOC106352859) coding protein psRNATarget
XM_013792501.1
ncRNA:22   GGCCAAGAAUUAAAAAAGUCAA   1
  =|**|||||||||||||*||||
targets:1571   UCUUUUCUUAAUUUUUUAAGUU   1592

2.5 PREDICTED: Brassica napus ethylene-responsive transcription factor WRI1-like (LOC106352859), transcript variant X1, mRNA ethylene-responsive transcription factor WRI1-like(LOC106352859) coding protein psRNATarget