| ncRNA ID | novel_bna_miR710 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA1:21455850-21456047 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR537657 |
| Length | 20 |
| Mature sequence(if miRNA) | 1 - AGGCUUGAGAGAAUUGAUUU - 20 |
| Stem-loop(if miRNA) |
-- GA A CU --UAU AAAAU UUACC CACACAU GUUUAGA - UAA G UUGG U AGGCUUGAGA AUUG UUUGG ACC AUCACC UGAC UUUUCCGU CC ACUC CAUGGU AC UUC AC G |||||||||| |||| ||||| ||| |||||| |||| |||||||| || |||| |||||| || ||| || UCCGAGCUUU UAAC AAAUU UGG UAGUGG ACUG AAGAGGCA GG UGAG GUGCUA UG AAG UG G GU AG - AC UACAU --CGU ---UA CAAAACU -AGUGAG C -UA A -UGA A |
| Stem-loop sequence | AGGCUUGAGAGAAUUGAUUUGGCUACCUAUAUCACCAAAAUUGACUUACCUUUUCCGUCACACAUCCGUUUAGAACUCCAUGGUUAAACGUUCUUGGACUGGAGUAGUGAAAGUAUAUCGUGCGAGUGAGUGAGGUCAAAACACGGAGAAAUGUCAUGCGGUGAUUACAUGGUCAUUAAACAAUGAUUUCGAGCCUUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013844090.1 |
|
3.0 | PREDICTED: Brassica napus putative pentatricopeptide repeat-containing protein At1g43010 (LOC106403245), mRNA | putative pentatricopeptide repeat-containing protein At1g43010(LOC106403245) | coding protein | psRNATarget | |||||||||
| XM_013827335.1 |
|
3.0 | PREDICTED: Brassica napus ATP-dependent Clp protease ATP-binding subunit ClpX-like (LOC106387473), mRNA | ATP-dependent Clp protease ATP-binding subunit ClpX-like(LOC106387473) | coding protein | psRNATarget |