ncRNA ID | novel_bna_miR709 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:3733754-3733846 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657 |
Length | 19 |
Mature sequence(if miRNA) | 1 - UAGUAGAAAACGAACAAGA - 19 |
Stem-loop(if miRNA) |
--UC      C                  ---GAGAAGAA   GC  U     GUUCGU UUCUACUAUCAUAUUAUG           GAU  CA A     |||||| ||||||||||||||||||           |||  ||     CAAGCA AAGAUGAUAGUAUAAUAC           CUA  GU U AGAA      A                  AAGAUGUAAAA   GU  A |
Stem-loop sequence | UCGUUCGUCUUCUACUAUCAUAUUAUGGAGAAGAAGAUGCCAUAUAUGUGAUCAAAAUGUAGAACAUAAUAUGAUAGUAGAAAACGAACAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013785367.1 |
|
2.0 | PREDICTED: Brassica napus uncharacterized LOC106346113 (LOC106346113), mRNA | uncharacterized LOC106346113(LOC106346113) | coding protein | psRNATarget | |||||||||
XM_013840565.1 |
|
2.5 | PREDICTED: Brassica napus truncated transcription factor CAULIFLOWER A-like (LOC106400171), mRNA | truncated transcription factor CAULIFLOWER A-like(LOC106400171) | coding protein | psRNATarget |