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BaseInfo

ncRNA ID novel_bna_miR706
Species Brassica napus
Class miRNA
Genome position ChrC7:29605823-29605885 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 24
Mature sequence(if miRNA) 40 - AGUUGCAGAUGAUAAGGCUGAAUG - 63
Stem-loop(if miRNA) --       AAA    A      --  UA  ACC
  UUCAGCC   UUAU GUCUGU  CU  AU   C
  |||||||   |||| ||||||  ||  ||
  AAGUCGG   AAUA UAGACG  GA  UA   A
GU       ---    G      UU  UC  AUU
Stem-loop sequence UUCAGCCAAAUUAUAGUCUGUCUUAAUACCCAUUAAUCUAGUUGCAGAUGAUAAGGCUGAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013883320.1
ncRNA:24   GUAAGUCGGAAUAGUAGACGUUGA   1
  ||||||*|=|||||||||||||||
targets:244   CAUUCACCUUUAUCAUCUGCAACU   267

2.0 PREDICTED: Brassica napus uncharacterized LOC106441513 (LOC106441513), mRNA uncharacterized LOC106441513(LOC106441513) coding protein psRNATarget