ncRNA ID | novel_bna_miR704 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:30841549-30841681 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537657;SRR537857;SRR538066 |
Length | 21 |
Mature sequence(if miRNA) | 113 - AGCGGAAUAUAAGAACUCAUC - 133 |
Stem-loop(if miRNA) |
--               -  CA                       A       G     C          AGCGGAAUAUAAGAA CU  UCUCUUAAUUUUUAACUAAAAAA CUAAGAA CGGUU UUAAAUAA   ||||||||||||||| ||  ||||||||||||||||||||||| ||||||| ||||| |||||||G   UCGCCUUAUAUUCUU GA  AGAGAAUUAAAAAUUGAUUUUUU GAUUCUU GCCAA AAUUUAUA AA               A  -C                       C       G     A        |
Stem-loop sequence | AGCGGAAUAUAAGAACUCAUCUCUUAAUUUUUAACUAAAAAAACUAAGAAGCGGUUCUUAAAUAAGAUAUUUAAAAACCGGUUCUUAGCUUUUUUAGUUAAAAAUUAAGAGACAGAUUCUUAUAUUCCGCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013810588.1 |
|
2.0 | PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA | putative auxin efflux carrier component 8(LOC106370582) | coding protein | psRNATarget | |||||||||
XM_013888671.1 |
|
2.5 | PREDICTED: Brassica napus flavonol synthase/flavanone 3-hydroxylase-like (LOC106446861), mRNA | flavonol synthase/flavanone 3-hydroxylase-like(LOC106446861) | coding protein | psRNATarget |