ncRNA ID | ath-miR774b-5p |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:22150128-22150266 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 25 - UGAGAUGAAGAUAUGGGUGAU - 45 |
Stem-loop(if miRNA) |
GAGU   GAUUAUAU     -C                       -------------  AUCAAUGCUUACGAUU     GUU        GGAUU  AUUUGAGAUGAAGAUAUGGGUGA             UG                U     |||        |||||  |||||||||||||||||||||||             ||     CGA        UCUAA  UAAGCUCUACUUUUAUACCUACU             AC                U UUUG   -AAAAAUU     UU                       UUUUCUUAAUUUA  GAUUGUAUUUAACUGG |
Stem-loop sequence | GAGUGUUGAUUAUAUGGAUUCAUUUGAGAUGAAGAUAUGGGUGAUGAUCAAUGCUUACGAUUUUGGUCAAUUUAUGUUAGCAAUUUAAUUCUUUUUCAUCCAUAUUUUCAUCUCGAAUUUAAUCUUUAAAAAAGCGUUU |
1 | PMID:20407027
"MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana"; Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC; Plant Cell. 22:1074-1089(2010). |