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BaseInfo

ncRNA ID ahy-miR3508
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UAGAGGGUCCCCAUGUUCUCA - NA
Stem-loop(if miRNA) AGGCAAA    --   UAUCUU        CA  C  A           C    C   A -      CUCGUAA     U
       AUUC  UCC      UGAGGACA  GG GA UCCUCUAUUCU UCUU UGC C UGCCGC       AUCAC A
       ||||  |||      ||||||||  || || ||||||||||| |||| ||| | ||||||       |||||
       UGAG  AGG      ACUCUUGU  CC CU GGGAGAUAAGA AGAA ACG G GUGGUG       UAGUG C
--CAUUN    UC   UUNAAU        AC  -  -           -    -   A U      -------     U
Stem-loop sequence AGGCAAAAUUCUCCUAUCUUUGAGGACACAGGCGAAUCCUCUAUUCUCUCUUCUGCACUGCCGCCUCGUAAAUCACUACUGUGAUGUGGUGUGAGCAAAGAAGAAUAGAGGGUCCCCAUGUUCUCAUAANUUGGACUGAGUNUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR577397.1
ncRNA:21   ACUCUUGUACCCCUGGGAGAU   1
  *|||=||||||||*|||||||
targets:263   GGAGGACAUGGGGUCCCUCUA   283

2.5 TSA: Arachis hypogaea Ahy.Unigene40434 mRNA sequence NA coding protein psRNATarget
GAER01034602.1
ncRNA:21   ACUCUUGUACCCCUGGGAGAU   1
  *|||=||||||||*|||||||
targets:1027   GGAGGACAUGGGGUCCCUCUA   1047

2.5 TSA: Arachis hypogaea Unigene34625 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).