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BaseInfo

ncRNA ID novel_bna_miR690
Species Brassica napus
Class miRNA
Genome position ChrC7:2952042-2952213 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537633
Length 27
Mature sequence(if miRNA) 1 - UUAAAUUCGUUGAGAUCUCUAUAGAUC - 27
Stem-loop(if miRNA) --        A    A      A                            A                 -------GAU   ACCUGGUG
  UCUAUAGA AUCU AACGAA UUUAAGAAGACAUUGAUCUUAGGCAUUC AAGACUAAAUAAGAUCU          ACC        U
  |||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||          |||
  AGAUAUCU UAGA UUGCUU AAAUUUUUCUGUAACUAGAAUCCGUAAG UUCUGAUUUAUUCUAGG          CAU        A
CU        C    G      -                            C                 AACACAAUAG   CGAAGGCG
Stem-loop sequence UCUAUAGAAAUCUAAACGAAAUUUAAGAAGACAUUGAUCUUAGGCAUUCAAAGACUAAAUAAGAUCUGAUACCACCUGGUGUAGCGGAAGCUACGAUAACACAAGGAUCUUAUUUAGUCUUCGAAUGCCUAAGAUCAAUGUCUUUUUAAAUUCGUUGAGAUCUCUAUAGAUC