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BaseInfo

ncRNA ID novel_bna_miR688
Species Brassica napus
Class miRNA
Genome position ChrC2:24549387-24549539 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495;SRR2015555
Length 24
Mature sequence(if miRNA) 130 - ACAGGAUUUUUUAGUUGAGGGUUU - 153
Stem-loop(if miRNA) -                -   A                    AUAAA              C          ACGA
 AACCCUCAACUAAAAA UCC GUGAAAUAAACCCUCAACUU     CCGUUAACAUAUGU ACCCUUUGUC    U
 |||||||||||||||| ||| ||||||||||||||||||||     |||||||||||||| ||||||||||    U
 UUGGGAGUUGAUUUUU AGG CAUUUUAUUUGGGAGUUGAA     GGCAAUUGUAUACA UGGGAGGCAG    U
U                U   A                    AUCAA              A          AUUU
Stem-loop sequence AACCCUCAACUAAAAAUCCAGUGAAAUAAACCCUCAACUUAUAAACCGUUAACAUAUGUCACCCUUUGUCACGAUUUUUUAGACGGAGGGUAACAUAUGUUAACGGAACUAAAGUUGAGGGUUUAUUUUACAGGAUUUUUUAGUUGAGGGUUU