ncRNA ID | novel_bna_miR688 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:24549387-24549539 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495;SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 130 - ACAGGAUUUUUUAGUUGAGGGUUU - 153 |
Stem-loop(if miRNA) |
-                -   A                    AUAAA              C          ACGA  AACCCUCAACUAAAAA UCC GUGAAAUAAACCCUCAACUU     CCGUUAACAUAUGU ACCCUUUGUC    U  |||||||||||||||| ||| ||||||||||||||||||||     |||||||||||||| ||||||||||    U  UUGGGAGUUGAUUUUU AGG CAUUUUAUUUGGGAGUUGAA     GGCAAUUGUAUACA UGGGAGGCAG    U U                U   A                    AUCAA              A          AUUU |
Stem-loop sequence | AACCCUCAACUAAAAAUCCAGUGAAAUAAACCCUCAACUUAUAAACCGUUAACAUAUGUCACCCUUUGUCACGAUUUUUUAGACGGAGGGUAACAUAUGUUAACGGAACUAAAGUUGAGGGUUUAUUUUACAGGAUUUUUUAGUUGAGGGUUU |