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BaseInfo

ncRNA ID novel_bna_miR686
Species Brassica napus
Class miRNA
Genome position ChrA1:12877065-12877221 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 21
Mature sequence(if miRNA) 1 - ACUUAUAAUUAAGUCGUCUGU - 21
Stem-loop(if miRNA) --                    U                               A             A      AUA
  ACUUAUAAUUAAGUCGUCUG AAAGUCUUCCAGCUGGAUGACUUAGUAGAAG CUUAUAAUUAAGU GUCUGG   G
  |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||   U
  UGAAUAUUAAUUCAGCAGAC UUUCAGAAGGUCGACCUACUGAAUCAUCUUC GAAUAUUAAUUCA CAGACC   C
UC                    C                               G             G      CUU
Stem-loop sequence ACUUAUAAUUAAGUCGUCUGUAAAGUCUUCCAGCUGGAUGACUUAGUAGAAGACUUAUAAUUAAGUAGUCUGGAUAGUCUUCCCAGACGACUUAAUUAUAAGGCUUCUACUAAGUCAUCCAGCUGGAAGACUUUCCAGACGACUUAAUUAUAAGUCU