| ncRNA ID | novel_bna_miR685 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA2:26934461-26934563 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR537633 |
| Length | 23 |
| Mature sequence(if miRNA) | 1 - UCGGAAUAUAAGAAAUGUCUCUU - 23 |
| Stem-loop(if miRNA) |
-- A - C AU UCGGA UAUAAGAAAU GUCU UUAAUUUUUGAUUAAAAAAACUAAGA U ||||| |||||||||| |||| |||||||||||||||||||||||||| AGUCU AUAUUCUUUG CAGA AAUUGAAAAUUGAUUUUUUUGAUUCU G AU C G A CG |
| Stem-loop sequence | UCGGAAUAUAAGAAAUGUCUCUUAAUUUUUGAUUAAAAAAACUAAGAAUUGGCUCUUAGUUUUUUUAGUUAAAAGUUAAAAGACGGUUUCUUAUACUCUGAUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013867914.1 |
|
2.5 | PREDICTED: Brassica napus homeobox-leucine zipper protein HDG12-like (LOC106427172), transcript variant X2, mRNA | homeobox-leucine zipper protein HDG12-like(LOC106427172) | coding protein | psRNATarget | |||||||||
| XM_013867913.1 |
|
2.5 | PREDICTED: Brassica napus homeobox-leucine zipper protein HDG12-like (LOC106427172), transcript variant X1, mRNA | homeobox-leucine zipper protein HDG12-like(LOC106427172) | coding protein | psRNATarget |