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BaseInfo

ncRNA ID	novel_bna_miR670
Species	Brassica napus
Class	miRNA
Genome position	ChrA6:34714438-34714569 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537633;SRR538066
Length	24
Mature sequence(if miRNA)	1 - AACGGAAUAUAAGAACUCGUCUCU - 24
Stem-loop(if miRNA)	--AA             -  C                G      AUG                  UA     CGGAAUAUAAGAA CU GUCUCUUAAUUUUUAA UAAAAA   UAAGAACUGGUUCUUAAA  A     ||||||||||||| || |||||||||||||||| ||||||   ||||||||||||||||||  G     GUUUUAUAUUCUU GA CAGAGAAUUGAAAAUU AUUUUU   AUUUUUGAUCGAGAAUUU  A AAUC             A  -                G      -CA                  UG
Stem-loop sequence	AACGGAAUAUAAGAACUCGUCUCUUAAUUUUUAAGUAAAAAAUGUAAGAACUGGUUCUUAAAUAAGAGUUUUAAGAGCUAGUUUUUAACUUUUUAGUUAAAAGUUAAGAGACAGAUUCUUAUAUUUUGCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013888671.1	ncRNA:24   UCUCUGCUCAAGAAUAUAAGGCAA   1   |****=||*||||||||||||||| targets:1253   AAUAUUGAUUUCUUAUAUUCCGUU   1276 Target Full Sequence	2.0	PREDICTED: Brassica napus flavonol synthase/flavanone 3-hydroxylase-like (LOC106446861), mRNA	flavonol synthase/flavanone 3-hydroxylase-like(LOC106446861)	coding protein	psRNATarget
XM_013830748.1	ncRNA:24   UCUCUGCUCAAGAAUAUAAGGCAA   1   ||=||||=||||||||||||||*| targets:21   AGGGACGGGUUCUUAUAUUCCGAU   44 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830747.1	ncRNA:24   UCUCUGCUCAAGAAUAUAAGGCAA   1   ||=||||=||||||||||||||*| targets:21   AGGGACGGGUUCUUAUAUUCCGAU   44 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013810588.1	ncRNA:24   UCUCUGCUCAAGAAUAUAAGGCAA   1   |*||||||||||||||||||||** targets:1248   AAAGACGAGUUCUUAUAUUCCGCC   1271 Target Full Sequence	2.5	PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA	putative auxin efflux carrier component 8(LOC106370582)	coding protein	psRNATarget
XM_013857661.1	ncRNA:24   UCUCUGCUCAAGAAUAUAAGGCAA   1   ****=|||*||||||||||=|||| targets:118   CCCUGCGAUUUCUUAUAUUUCGUU   141 Target Full Sequence	2.5	PREDICTED: Brassica napus cannabidiolic acid synthase-like 2 (LOC106416753), mRNA	cannabidiolic acid synthase-like 2(LOC106416753)	coding protein	psRNATarget