Search result

BaseInfo

ncRNA ID novel_bna_miR665
Species Brassica napus
Class miRNA
Genome position ChrA5:32336510-32336654 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537633
Length 26
Mature sequence(if miRNA) 1 - GAAGUUUUUAGCGGAAUAUAAGAAUC - 26
Stem-loop(if miRNA) -- AA                                         UAAAAAAAAC                  AC
  G  GUUUUUAGCGGAAUAUAAGAAUCCGUCUCUUAACUUUUAAC          UAAGAACCGGUUCUUAAA  U
  |  |||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||  C
  C  UAAGAGUUGCCUUAUAUUUUUAGGCAGAGAAUUGAAAAUUG          AUUCUUGGCCGAGAAUUU  U
CA CC                                         --------CA                  AU
Stem-loop sequence GAAGUUUUUAGCGGAAUAUAAGAAUCCGUCUCUUAACUUUUAACUAAAAAAAACUAAGAACCGGUUCUUAAAACUCUUAUUUAAGAGCCGGUUCUUAACGUUAAAAGUUAAGAGACGGAUUUUUAUAUUCCGUUGAGAAUCCCAC