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BaseInfo

ncRNA ID	novel_bna_miR664
Species	Brassica napus
Class	miRNA
Genome position	ChrA4:394124-394218 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537633
Length	20
Mature sequence(if miRNA)	1 - AGAAAUAAAUAUGGCUGUGG - 20
Stem-loop(if miRNA)	--         GG             -UG  GUUUCAAAAAAAAAUUU   ACAGCUGUA  UUAUUUCUAGAGC   UG                 A   |||||||||  |||||||||||||   ||                 A   UGUCGGUAU  AAUAAAGAUUUCG   UU                 A GG         -A             UGG  UAAGUCUCGUUAGUUCG
Stem-loop sequence	ACAGCUGUAGGUUAUUUCUAGAGCUGUGGUUUCAAAAAAAAAUUUAAAGCUUGAUUGCUCUGAAUUUGGUGCUUUAGAAAUAAAUAUGGCUGUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013845494.1	ncRNA:20   GGUGUCGGUAUAAAUAAAGA   1   ||||||||*||||||||||| targets:2337   CCACAGCCCUAUUUAUUUCU   2356 Target Full Sequence	1.5	PREDICTED: Brassica napus oligopeptide transporter 4 (LOC106404826), mRNA	oligopeptide transporter 4(LOC106404826)	coding protein	psRNATarget
XM_013837557.1	ncRNA:20   GGUGUCGGUAUAAAUAAAGA   1   ||||=|||*||||||||||| targets:1020   CCACGGCCCUAUUUAUUUCU   1039 Target Full Sequence	2.5	PREDICTED: Brassica napus 4-coumarate--CoA ligase 2-like (LOC106397021), partial mRNA	4-coumarate--CoA ligase 2-like(LOC106397021)	coding protein	psRNATarget
XM_013869428.1	ncRNA:20   GGUGUCGGUAUAAAUAAAGA   1   ||||||||*||||||||||* targets:1305   CCACAGCCCUAUUUAUUUCC   1324 Target Full Sequence	2.5	PREDICTED: Brassica napus pectin acetylesterase 2-like (LOC106428681), transcript variant X1, mRNA	pectin acetylesterase 2-like(LOC106428681)	coding protein	psRNATarget
XM_013869429.1	ncRNA:20   GGUGUCGGUAUAAAUAAAGA   1   ||||||||*||||||||||* targets:1227   CCACAGCCCUAUUUAUUUCC   1246 Target Full Sequence	2.5	PREDICTED: Brassica napus pectin acetylesterase 2-like (LOC106428681), transcript variant X2, mRNA	pectin acetylesterase 2-like(LOC106428681)	coding protein	psRNATarget
XM_013869433.1	ncRNA:20   GGUGUCGGUAUAAAUAAAGA   1   ||||||||*||||||||||* targets:735   CCACAGCCCUAUUUAUUUCC   754 Target Full Sequence	2.5	PREDICTED: Brassica napus pectin acetylesterase 2-like (LOC106428684), mRNA	pectin acetylesterase 2-like(LOC106428684)	coding protein	psRNATarget