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BaseInfo

ncRNA ID	novel_bna_miR663
Species	Brassica napus
Class	miRNA
Genome position	ChrA4:37743353-37743484 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537633;SRR537857;SRR538067
Length	20
Mature sequence(if miRNA)	113 - AGCGGAAUAUAAGAACCAUC - 132
Stem-loop(if miRNA)	--    G            AU           -      U    A          U        AC   AGCG AAUAUAAGAACC  CUUUUAACUUU AAUUAA AAAA CUAAGAACUG CUCUUAAA  U   |||| ||||||||||||  ||||||||||| |||||| |||| |||||||||| ||||||||  C   UCGC UUAUAUUCUUGG  GAGAAUUGAAA UUGAUU UUUU GAUUCUUGGC GAGAAUUU  U AA    A            CG           A      C    C          C        AU
Stem-loop sequence	AGCGGAAUAUAAGAACCAUCUUUUAACUUUAAUUAAUAAAAACUAAGAACUGUCUCUUAAAACUCUUAUUUAAGAGCCGGUUCUUAGCUUUUCUUAGUUAAAAGUUAAGAGGCGGUUCUUAUAUUACGCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013865935.1	ncRNA:20   CUACCAAGAAUAUAAGGCGA   1   *|||*|||*||||||||||| targets:9709   AAUGAUUCAUAUAUUCCGCU   9728 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106425218 (LOC106425218), mRNA	uncharacterized LOC106425218(LOC106425218)	coding protein	psRNATarget
XM_013886323.1	ncRNA:20   CUACCAAGAAUAUAAGGCGA   1   *|||*|||*||||||||||| targets:9671   AAUGAUUCAUAUAUUCCGCU   9690 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106444897 (LOC106444897), transcript variant X2, mRNA	uncharacterized LOC106444897(LOC106444897)	coding protein	psRNATarget
XM_013886322.1	ncRNA:20   CUACCAAGAAUAUAAGGCGA   1   *|||*|||*||||||||||| targets:7143   AAUGAUUCAUAUAUUCCGCU   7162 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106444897 (LOC106444897), transcript variant X1, mRNA	uncharacterized LOC106444897(LOC106444897)	coding protein	psRNATarget