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BaseInfo

ncRNA ID novel_bna_miR661
Species Brassica napus
Class miRNA
Genome position ChrC7:8379954-8380043 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495;SRR1363496
Length 23
Mature sequence(if miRNA) 68 - UUAAAAGUUAAGAGACGGGUUCA - 90
Stem-loop(if miRNA) --                     CUAAAAAAG   AGAACUGGUUC
  AACCCGUCUCUUAACUUUUAA         UUA           U
  |||||||||||||||||||||         |||
  UUGGGCAGAGAAUUGAAAAUU         AUU           U
AC                     --UACUCUA   UAUAAAAUAAA
Stem-loop sequence AACCCGUCUCUUAACUUUUAACUAAAAAAGUUAAGAACUGGUUCUUAAAUAAAAUAUUUAAUCUCAUUUAAAAGUUAAGAGACGGGUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013866316.1
ncRNA:23   ACUUGGGCAGAGAAUUGAAAAUU   1
  *|||*|*||=|||||||||||||
targets:436   AGAAACAGUUUCUUAACUUUUAA   458

3.0 PREDICTED: Brassica napus uncharacterized LOC106425589 (LOC106425589), mRNA uncharacterized LOC106425589(LOC106425589) coding protein psRNATarget