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BaseInfo

ncRNA ID	novel_bna_miR652
Species	Brassica napus
Class	miRNA
Genome position	ChrC8:26408675-26408748 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537612
Length	20
Mature sequence(if miRNA)	55 - UUAGAUGACCAUCAACAAAU - 74
Stem-loop(if miRNA)	--        U A      U  AU          CUC   UUGUUGAU G CAUCUA GC  AUUGAUCAUC   G   |||||||| | |||||| ||  ||||||||||   AACAACUA C GUAGAU UG  UAGCUAGUAG   U UA        C A      U  CU          UUG
Stem-loop sequence	UUGUUGAUUGACAUCUAUGCAUAUUGAUCAUCCUCGUGUUGAUGAUCGAUUCGUUUAGAUGACCAUCAACAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013863699.1	ncRNA:20   UAAACAACUACCAGUAGAUU   1   |||||||||||||||||||| targets:85   AUUUGUUGAUGGUCAUCUAA   104 Target Full Sequence	0.0	PREDICTED: Brassica napus E3 ubiquitin-protein ligase BAH1-like (LOC106422917), mRNA	E3 ubiquitin-protein ligase BAH1-like(LOC106422917)	coding protein	psRNATarget
XM_013853381.1	ncRNA:20   UAAACAACUACCAGUAGAUU   1   =||||||||||||||||||| targets:105   GUUUGUUGAUGGUCAUCUAA   124 Target Full Sequence	0.0	PREDICTED: Brassica napus E3 ubiquitin-protein ligase BAH1-like (LOC106412466), mRNA	E3 ubiquitin-protein ligase BAH1-like(LOC106412466)	coding protein	psRNATarget
XM_013809428.1	ncRNA:20   UAAACAACUACCAGUAGAUU   1   =||||||||||||||||||| targets:355   GUUUGUUGAUGGUCAUCUAA   374 Target Full Sequence	0.0	PREDICTED: Brassica napus E3 ubiquitin-protein ligase BAH1-like (LOC106369292), mRNA	E3 ubiquitin-protein ligase BAH1-like(LOC106369292)	coding protein	psRNATarget
XM_013842530.1	ncRNA:20   UAAACAACUACCAGUAGAUU   1   |||||||||||*|||||||| targets:124   AUUUGUUGAUGAUCAUCUAA   143 Target Full Sequence	1.5	PREDICTED: Brassica napus E3 ubiquitin-protein ligase BAH1-like (LOC106401914), mRNA	E3 ubiquitin-protein ligase BAH1-like(LOC106401914)	coding protein	psRNATarget