ncRNA ID | ath-miRf10610-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - CACUCGACCAUGAGGUCGAGUG - NA |
Stem-loop(if miRNA) |
     C        CC  -       CA    ACAUCACCACUUCACUUCACCA    AACACGAGGUCGAGU GAGAC ACUCGACC  CA GGUCGAG  GAGG                      CUCG               G ||||| ||||||||  || |||||||  ||||                      |||| UUCUG UGAGCUGG  GU CCAGCUC  CUUC                      AGCU               C      -        -A  A       -A    -------------------ACU    CACUACCUCUGCUCC |
Stem-loop sequence | GAGACCACUCGACCCCCAGGUCGAGCAGAGGACAUCACCACUUCACUUCACCACUCGAACACGAGGUCGAGUGCCCUCGUCUCCAUCACUCGAUCACUUCACUCGACCAUGAGGUCGAGUGUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183005.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY231407.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds | NA | coding protein | psRNATarget |