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BaseInfo

ncRNA ID novel_bna_miR645
Species Brassica napus
Class miRNA
Genome position ChrC5:19261772-19261896 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537612;SRR537633;SRR537657;SRR538066
Length 26
Mature sequence(if miRNA) 100 - GAAGUUUUUAGCGGAAUAUAAGAAUC - 125
Stem-loop(if miRNA) -- A       A                              U        AA         C
  G AGUUUUU GCGGAAUAUAAGAAUCUGUCUCUUAACUUU AACUAAAA  AGCUAAGAG C
  | ||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||
  C UUAAGAA CGCUUUAUAUUCUUAGACAGAGAAUUGAAA UUGAUUUU  UCGAUUCUC G
AA C       C                              U        -C         G
Stem-loop sequence GAAGUUUUUAGCGGAAUAUAAGAAUCUGUCUCUUAACUUUUAACUAAAAAAAGCUAAGAGCCGGCUCUUAGCUCUUUUAGUUUAAAGUUAAGAGACAGAUUCUUAUAUUUCGCCAAGAAUUCCAA