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BaseInfo

ncRNA ID novel_bna_miR643
Species Brassica napus
Class miRNA
Genome position ChrC4:29299595-29299738 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537612
Length 27
Mature sequence(if miRNA) 118 - UCUUAGCGGAAUAUAAGAACCCGUAUC - 144
Stem-loop(if miRNA) --                   C C  A               UAA      AC         AU       UA
  UCUUAGCGGAAUAUAAGAA C GU UCUUAACUUUUAACU   AAAAAA  UAAGAACUG  UCUUAAA  A
  ||||||||||||||||||| | || |||||||||||||||   ||||||  |||||||||  |||||||  G
  AGAAUCGCCUUAUAUUUUU G CA AGAAUUGGAAAUUGA   UUUUUU  AUUCUUGGC  AGAAUUU  A
CA                   A A  G               ---      CA         CG       UG
Stem-loop sequence UCUUAGCGGAAUAUAAGAACCCGUAUCUUAACUUUUAACUUAAAAAAAAACUAAGAACUGAUUCUUAAAUAAGAGUUUUAAGAGCCGGUUCUUAACUUUUUUAGUUAAAGGUUAAGAGACAGAUUUUUAUAUUCCGCUAAGAAC