ncRNA ID | novel_bna_miR643 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:29299595-29299738 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537612 |
Length | 27 |
Mature sequence(if miRNA) | 118 - UCUUAGCGGAAUAUAAGAACCCGUAUC - 144 |
Stem-loop(if miRNA) |
--                   C C  A               UAA      AC         AU       UA   UCUUAGCGGAAUAUAAGAA C GU UCUUAACUUUUAACU   AAAAAA  UAAGAACUG  UCUUAAA  A   ||||||||||||||||||| | || |||||||||||||||   ||||||  |||||||||  |||||||  G   AGAAUCGCCUUAUAUUUUU G CA AGAAUUGGAAAUUGA   UUUUUU  AUUCUUGGC  AGAAUUU  A CA                   A A  G               ---      CA         CG       UG |
Stem-loop sequence | UCUUAGCGGAAUAUAAGAACCCGUAUCUUAACUUUUAACUUAAAAAAAAACUAAGAACUGAUUCUUAAAUAAGAGUUUUAAGAGCCGGUUCUUAACUUUUUUAGUUAAAGGUUAAGAGACAGAUUUUUAUAUUCCGCUAAGAAC |