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BaseInfo

ncRNA ID	novel_bna_miR641
Species	Brassica napus
Class	miRNA
Genome position	ChrC2:24815405-24815513 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	24
Mature sequence(if miRNA)	86 - AGAGUGGAAAAUGGAGUAGUGAAC - 109
Stem-loop(if miRNA)	--            G                  -     CAUUGCUCUAU        UA   AGAGUGGAAAAU GAGUAGUGAACAAAAAAA UAAAA           AAAUUGAA  A   |||||||||||| |||||||||||||||||| |||||           ||||||||   UCUCAUUUUUUA CUCGUUAUUUGUUUUUUU GUUUU           UUUGAUUU  U AA            A                  U     ----------U        UU
Stem-loop sequence	AGAGUGGAAAAUGGAGUAGUGAACAAAAAAAUAAAACAUUGCUCUAUAAAUUGAAUAAUUUUUUAGUUUUUUUUGUUUUUUUUGUUUAUUGCUCAAUUUUUUACUCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013885157.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   *|||-||*|||||||||=|||||| targets:564   CUUC-CUUCUCCAUUUUUCACUCU   586 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase 22-like (LOC106443611), mRNA	peroxidase 22-like(LOC106443611)	coding protein	psRNATarget
XM_013850566.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   *|||-||*|||||||||=|||||| targets:562   CUUC-CUUCUCCAUUUUUCACUCU   584 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase 22-like (LOC106410063), mRNA	peroxidase 22-like(LOC106410063)	coding protein	psRNATarget
XM_013877069.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   *|||-||*|||||||||=|||||| targets:562   CUUC-CUUCUCCAUUUUUCACUCU   584 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase 22-like (LOC106436114), mRNA	peroxidase 22-like(LOC106436114)	coding protein	psRNATarget
XM_013877070.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   *|||-||*|||||||||=|||||| targets:533   CUUC-CUUCUCCAUUUUUCACUCU   555 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase 22-like (LOC106436115), mRNA	peroxidase 22-like(LOC106436115)	coding protein	psRNATarget
XM_013885158.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   *|||-||*|||||||||=|||||| targets:538   CUUC-CUUCUCCAUUUUUCACUCU   560 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase 22-like (LOC106443612), mRNA	peroxidase 22-like(LOC106443612)	coding protein	psRNATarget
XM_013890808.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   *|||-||*|||||||||=|||||| targets:522   CUUC-CUUCUCCAUUUUUCACUCU   544 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase C3-like (LOC106449000), mRNA	peroxidase C3-like(LOC106449000)	coding protein	psRNATarget
XM_013843991.1	ncRNA:24   CAAGUGAUGAGGUAAAAGGUGAGA   1   **||*||*|||||||||=|||||| targets:590   UCUCCCUUCUCCAUUUUUCACUCU   613 Target Full Sequence	2.5	PREDICTED: Brassica napus peroxidase C3 (LOC106403148), mRNA	peroxidase C3(LOC106403148)	coding protein	psRNATarget