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BaseInfo

ncRNA ID ath-miRf10609-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CACUCGACCAUGAGGUCGAGUG - NA
Stem-loop(if miRNA)      C        CC  -       CA    ACAUCACCACUUCACUUCAC   UCGACCACGAGGUCGAG
GAGAC ACUCGACC  CA GGUCGAG  GAGG                    CAC                 U
||||| ||||||||  || |||||||  ||||                    |||
UUCUG UGAGCUGG  GU CCAGCUC  CUUC                    AGC                 G
     -        -A  A       -A    -----------------ACU   UCACUACCUCUGCUCCC
Stem-loop sequence GAGACCACUCGACCCCCAGGUCGAGCAGAGGACAUCACCACUUCACUUCACCACUCGACCACGAGGUCGAGUGCCCUCGUCUCCAUCACUCGAUCACUUCACUCGACCAUGAGGUCGAGUGUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183005.1
ncRNA:22   GUGAGCUGGAGUACCAGCUCAC   1
  =||||||||||*||||||||||
targets:2015   UACUCGACCUCUUGGUCGAGUG   2036

1.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
AY231407.1
ncRNA:22   GUGAGCUGGAGUACCAGCUCAC   1
  |||||||||*|||||||||||*
targets:536   CACUCGACCCCAUGGUCGAGUA   557

2.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget