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BaseInfo

ncRNA ID novel_bna_miR634
Species Brassica napus
Class miRNA
Genome position ChrC2:26482974-26483081 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 21
Mature sequence(if miRNA) 1 - AGACUUCGUAGAAGACUUCCU - 21
Stem-loop(if miRNA) --A         U               UA    AA   CUG        C  A
   AAGUCUUCU CGAAGUCUUACACUC  GAAG  UUC   GAAGUUUU AG C
   ||||||||| |||||||||||||||  ||||  |||   |||||||| ||
   UUCAGAAGA GCUUCAGAAUGUGAG  CUUC  AAG   CUUCAGAA UC G
UCC         U               UC    AG   AUA        U  A
Stem-loop sequence AAAGUCUUCUUCGAAGUCUUACACUCUAGAAGAAUUCCUGGAAGUUUUCAGACGACUUAAGACUUCAUAGAAGACUUCCUGAGUGUAAGACUUCGUAGAAGACUUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013832972.1
ncRNA:21   UCCUUCAGAAGAUGCUUCAGA   1
  **|||||||||*||||||||*
targets:1239   CUGAAGUCUUCCACGAAGUCC   1259

2.5 PREDICTED: Brassica napus BTB/POZ domain-containing protein At1g55760 (LOC106392180), mRNA BTB/POZ domain-containing protein At1g55760(LOC106392180) coding protein psRNATarget
XM_013793946.1
ncRNA:21   UCCUUCAGAAGAUGCUUCAGA   1
  **|||||||||*||||||||*
targets:1246   CUGAAGUCUUCCACGAAGUCC   1266

2.5 PREDICTED: Brassica napus BTB/POZ domain-containing protein At1g55760-like (LOC106354091), mRNA BTB/POZ domain-containing protein At1g55760-like(LOC106354091) coding protein psRNATarget