ncRNA ID | novel_bna_miR634 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:26482974-26483081 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGACUUCGUAGAAGACUUCCU - 21 |
Stem-loop(if miRNA) |
--A         U               UA    AA   CUG        C  A    AAGUCUUCU CGAAGUCUUACACUC  GAAG  UUC   GAAGUUUU AG C    ||||||||| |||||||||||||||  ||||  |||   |||||||| ||    UUCAGAAGA GCUUCAGAAUGUGAG  CUUC  AAG   CUUCAGAA UC G UCC         U               UC    AG   AUA        U  A |
Stem-loop sequence | AAAGUCUUCUUCGAAGUCUUACACUCUAGAAGAAUUCCUGGAAGUUUUCAGACGACUUAAGACUUCAUAGAAGACUUCCUGAGUGUAAGACUUCGUAGAAGACUUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013832972.1 |
|
2.5 | PREDICTED: Brassica napus BTB/POZ domain-containing protein At1g55760 (LOC106392180), mRNA | BTB/POZ domain-containing protein At1g55760(LOC106392180) | coding protein | psRNATarget | |||||||||
XM_013793946.1 |
|
2.5 | PREDICTED: Brassica napus BTB/POZ domain-containing protein At1g55760-like (LOC106354091), mRNA | BTB/POZ domain-containing protein At1g55760-like(LOC106354091) | coding protein | psRNATarget |