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BaseInfo

ncRNA ID	novel_bna_miR630
Species	Brassica napus
Class	miRNA
Genome position	ChrC1:40565147-40565239 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537612
Length	20
Mature sequence(if miRNA)	1 - UCGAUAAACCUCUGCAUCCA - 20
Stem-loop(if miRNA)	--  G    C    C       A    C   GAAAA   -AU    G   GA GCAG GGUU AUCGAUC AUUC UGU     AUG   GUUG A   || |||| |||| ||||||| |||| |||     |||   ||||   CU CGUC CCAA UAGCUAG UAAG ACG     UAC   UAAC A AC  A    U    A       C    U   AACGG   AUU    A
Stem-loop sequence	GAGGCAGCGGUUCAUCGAUCAAUUCCUGUGAAAAAUGAUGUUGGAAACAAUUUACAUGGCAAGCAUGAAUCGAUCGAUAAACCUCUGCAUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013810898.1	ncRNA:20   ACCUACGUCUCCA-AAUAGCU   1   |||||||||||||-||||||| targets:3103   UGGAUGCAGAGGUAUUAUCGA   3123 Target Full Sequence	3.0	PREDICTED: Brassica napus endoribonuclease Dicer homolog 1 (LOC106370901), mRNA	endoribonuclease Dicer homolog 1(LOC106370901)	coding protein	psRNATarget
XM_013815873.1	ncRNA:20   ACCUACGUCUCCA-AAUAGCU   1   |||||||||||||-||||||| targets:3103   UGGAUGCAGAGGUAUUAUCGA   3123 Target Full Sequence	3.0	PREDICTED: Brassica napus endoribonuclease Dicer homolog 1 (LOC106375864), mRNA	endoribonuclease Dicer homolog 1(LOC106375864)	coding protein	psRNATarget
XM_013841052.1	ncRNA:20   ACCUACGUCUCCA-AAUAGCU   1   |||||||||||||-||||||| targets:3199   UGGAUGCAGAGGUAUUAUCGA   3219 Target Full Sequence	3.0	PREDICTED: Brassica napus endoribonuclease Dicer homolog 1-like (LOC106400685), mRNA	endoribonuclease Dicer homolog 1-like(LOC106400685)	coding protein	psRNATarget
XM_013791170.1	ncRNA:20   ACCUACGUCUCCAAAUAGCU   1   **||||*||||||||||||* targets:332   GAGAUGGAGAGGUUUAUCGU   351 Target Full Sequence	3.0	PREDICTED: Brassica napus auxin-responsive protein SAUR41 (LOC106351360), mRNA	auxin-responsive protein SAUR41(LOC106351360)	coding protein	psRNATarget
XM_013891479.1	ncRNA:20   ACCUACGUCUCCAAAUAGCU   1   **||||*||||||||||||* targets:332   GAGAUGGAGAGGUUUAUCGU   351 Target Full Sequence	3.0	PREDICTED: Brassica napus auxin-responsive protein SAUR41 (LOC106449782), mRNA	auxin-responsive protein SAUR41(LOC106449782)	coding protein	psRNATarget
XM_013840271.1	ncRNA:20   ACCUACGUCUCCAAAUAGCU   1   **|||*|||||||||||||* targets:76   CUGAUCCAGAGGUUUAUCGC   95 Target Full Sequence	3.0	PREDICTED: Brassica napus importin subunit beta-1 (LOC106399821), mRNA	importin subunit beta-1(LOC106399821)	coding protein	psRNATarget