ncRNA ID | ath-miRf10607-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AUGCUCGACCUGGGGGUCGAGUG - NA |
Stem-loop(if miRNA) |
AGGU  A G          GG          -   UG    AGUGGUG   -GAAGA           CAGGU     GA A CACUCGACCU  GGGUCGAGCG AGG  AUCG       UCA      UACUCGACUUC     G     || | ||||||||||  |||||||||| |||  ||||       |||      |||||||||||     G     CU U GUGAGCUGGG  UCCAGCUCGU UCC  UAGU       AGU      GUGAGCUGGAG     A --UU  C G          GG          A   UG    --GGUGA   GAAGUG           AAGUG |
Stem-loop sequence | AGGUGAAAGCACUCGACCUGGGGGUCGAGCGAGGUGAUCGAGUGGUGUCAGAAGAUACUCGACUUCCAGGUGGAGUGAAGAGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUAUGCUCGACCUGGGGGUCGAGUGGUCUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_103391.1 |
|
2.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget | |||||||||
BT025674.1 |
|
2.5 | Arabidopsis thaliana | NA | coding protein | psRNATarget |