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BaseInfo

ncRNA ID ath-miRf10607-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AUGCUCGACCUGGGGGUCGAGUG - NA
Stem-loop(if miRNA) AGGU  A G          GG          -   UG    AGUGGUG   -GAAGA           CAGGU
    GA A CACUCGACCU  GGGUCGAGCG AGG  AUCG       UCA      UACUCGACUUC     G
    || | ||||||||||  |||||||||| |||  ||||       |||      |||||||||||     G
    CU U GUGAGCUGGG  UCCAGCUCGU UCC  UAGU       AGU      GUGAGCUGGAG     A
--UU  C G          GG          A   UG    --GGUGA   GAAGUG           AAGUG
Stem-loop sequence AGGUGAAAGCACUCGACCUGGGGGUCGAGCGAGGUGAUCGAGUGGUGUCAGAAGAUACUCGACUUCCAGGUGGAGUGAAGAGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUAUGCUCGACCUGGGGGUCGAGUGGUCUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103391.1
ncRNA:23   GUGAGCUGGGGGUCCAGCUCGUA   1
  ||||||||||||||||||||=|*
targets:1105   CACUCGACCCCCAGGUCGAGUAG   1127

2.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
BT025674.1
ncRNA:23   GUGAGCUGGGGGUCCAGCUCGUA   1
  =|||||||||||||||||||=|*
targets:188   UACUCGACCCCCAGGUCGAGUAA   210

2.5 Arabidopsis thaliana NA coding protein psRNATarget