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BaseInfo

ncRNA ID	novel_bna_miR610
Species	Brassica napus
Class	miRNA
Genome position	ChrC1:40939434-40939516 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495;SRR1363496
Length	21
Mature sequence(if miRNA)	63 - GCAAGUUGAUUUUGGCUCUGU - 83
Stem-loop(if miRNA)	--U         A          AUUUUACUG   G   CUA    GAGCCAAAG UGGCUUGCCG         AUU AGU   G    ||||||||| ||||||||||         ||| |||    CUCGGUUUU GUUGAACGGC         UAG UCA   A UGU         A          CGUUAGUUA   -   AAA
Stem-loop sequence	UGAGCCAAAGAUGGCUUGCCGAUUUUACUGAUUGAGUCUAGAAAAACUGAUAUUGAUUGCCGGCAAGUUGAUUUUGGCUCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013812292.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:393   AAAGAGGCAAAUUCAACUUGC   413 Target Full Sequence	2.5	PREDICTED: Brassica napus myb-related protein Zm38-like (LOC106372146), transcript variant X5, mRNA	myb-related protein Zm38-like(LOC106372146)	coding protein	psRNATarget
XM_013808121.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:272   AAAGAGGCAAAUUCAACUUGC   292 Target Full Sequence	2.5	PREDICTED: Brassica napus transcription factor MYB34-like (LOC106368213), transcript variant X1, mRNA	transcription factor MYB34-like(LOC106368213)	coding protein	psRNATarget
XM_013808122.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:305   AAAGAGGCAAAUUCAACUUGC   325 Target Full Sequence	2.5	PREDICTED: Brassica napus transcription factor MYB34-like (LOC106368213), transcript variant X2, mRNA	transcription factor MYB34-like(LOC106368213)	coding protein	psRNATarget
KC966734.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:299   AAAGAGGCAAAUUCAACUUGC   319 Target Full Sequence	2.5	Brassica napus MYB transcription factor 16 (MYB16.1) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001316195.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:299   AAAGAGGCAAAUUCAACUUGC   319 Target Full Sequence	2.5	Brassica napus transcription factor MYB34-like (LOC106367183), mRNA	transcription factor MYB34-like(LOC106367183)	coding protein	psRNATarget
XM_013865405.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:330   AAAGAGGCAAAUUCAACUUGC   350 Target Full Sequence	2.5	PREDICTED: Brassica napus myb-related protein Hv1-like (LOC106424645), mRNA	myb-related protein Hv1-like(LOC106424645)	coding protein	psRNATarget
XM_013812291.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:393   AAAGAGGCAAAUUCAACUUGC   413 Target Full Sequence	2.5	PREDICTED: Brassica napus myb-related protein Zm38-like (LOC106372146), transcript variant X4, mRNA	myb-related protein Zm38-like(LOC106372146)	coding protein	psRNATarget
XM_013812290.1	ncRNA:21   UGUCUCGGUUUUAGUUGAACG   1   |*||||*||||*||||||||| targets:395   AAAGAGGCAAAUUCAACUUGC   415 Target Full Sequence	2.5	PREDICTED: Brassica napus myb-related protein Zm38-like (LOC106372146), transcript variant X3, mRNA	myb-related protein Zm38-like(LOC106372146)	coding protein	psRNATarget