ncRNA ID | novel_bna_miR601 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC1:36441047-36441206 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 138 - UAGGAUUUAGUGAUUAGGAUUUA - 160 |
Stem-loop(if miRNA) |
--                C             A     C                             AAUCAAAAAUAU   AAUCCUAAUCACUAAA CCUAAACCCUUGG UAAAC CUGAACCCUUGGAUAAAUCAUAAACUCUA            U   |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||   UUAGGAUUAGUGAUUU GGAUUUGGGAACC AUUUG GACUUGGGAACCUAUUUAGUAUUUGAGAU            U AU                A             C     A                             CCCAAAUUAAAA |
Stem-loop sequence | AAUCCUAAUCACUAAACCCUAAACCCUUGGAUAAACCCUGAACCCUUGGAUAAAUCAUAAACUCUAAAUCAAAAAUAUUUAAAAUUAAACCCUAGAGUUUAUGAUUUAUCCAAGGGUUCAGAGUUUACCCAAGGGUUUAGGAUUUAGUGAUUAGGAUUUA |