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BaseInfo

ncRNA ID novel_bna_miR601
Species Brassica napus
Class miRNA
Genome position ChrC1:36441047-36441206 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 23
Mature sequence(if miRNA) 138 - UAGGAUUUAGUGAUUAGGAUUUA - 160
Stem-loop(if miRNA) --                C             A     C                             AAUCAAAAAUAU
  AAUCCUAAUCACUAAA CCUAAACCCUUGG UAAAC CUGAACCCUUGGAUAAAUCAUAAACUCUA            U
  |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||
  UUAGGAUUAGUGAUUU GGAUUUGGGAACC AUUUG GACUUGGGAACCUAUUUAGUAUUUGAGAU            U
AU                A             C     A                             CCCAAAUUAAAA
Stem-loop sequence AAUCCUAAUCACUAAACCCUAAACCCUUGGAUAAACCCUGAACCCUUGGAUAAAUCAUAAACUCUAAAUCAAAAAUAUUUAAAAUUAAACCCUAGAGUUUAUGAUUUAUCCAAGGGUUCAGAGUUUACCCAAGGGUUUAGGAUUUAGUGAUUAGGAUUUA