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BaseInfo

ncRNA ID	ath-miR774a
Species	Arabidopsis thaliana
Class	miRNA
Genome position	chr1:22149936-22150033 [+]
Reference genome	TAIR10
Source	miRBase
Length	21
Mature sequence(if miRNA)	70 - UUGGUUACCCAUAUGGCCAUC - 90
Stem-loop(if miRNA)	UC    C          U              U    AUU     C   U   AUUU AGAUGGCUGU UGGGUAACUAAUAU UAAG   UUGGU AAU U   |||| |||||||||| |||||||||||||| ||||   ||||| |||   UAAA UCUACCGGUA ACCCAUUGGUUAUA AUUU   AACCA UUG A UU    C          U              U    ---     -   A
Stem-loop sequence	UCAUUUCAGAUGGCUGUUUGGGUAACUAAUAUUUAAGAUUUUGGUCAAUUUAAGUUACCAAUUUAUAUAUUGGUUACCCAUAUGGCCAUCUCAAAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ056598.1	ncRNA:21   CUACCGGUAUACCCAUUGGUU   1   ||||||||||||||||||||* targets:789   GAUGGCCAUAUGGGUAACCAC   809 Target Full Sequence	1.0	Arabidopsis thaliana F-box family protein (At3g19890) mRNA, complete cds	NA	coding protein	psRNATarget
NM_112879.1	ncRNA:21   CUACCGGUAUACCCAUUGGUU   1   ||||||||||||||||||||* targets:789   GAUGGCCAUAUGGGUAACCAC   809 Target Full Sequence	1.0	Arabidopsis thaliana F-box family protein partial mRNA	F-box family protein(AT3G19890)	coding protein	psRNATarget

Reference

1	PMID:16954541 "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant"; Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC; Genome Res. 16:1276-1288(2006).
2	PMID:17299599 "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007).