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BaseInfo

ncRNA ID	ath-miRf10604-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CUGGUGUCGAUCGACACCCAG - NA
Stem-loop(if miRNA)	CC      -              -      UUCU     AUCGACAC  UAUUGG UGUCGGUCGACACU GUCGCG    GUAGU ||||||||  |||||| |||||||||||||| ||||||    ||||G UGGCUGUG  AUGACC ACAGCUAGCUGUGG CGGUGC    CAUCU         --      C              U      ----
Stem-loop sequence	AUCGACACCCUAUUGGUGUCGGUCGACACUGUCGCGUUCUGUAGUGUCUACCGUGGCUGGUGUCGAUCGACACCCAGUAGUGUCGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069810.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   ||||||||||||||||||||| targets:333   CUGGGUGUCGAUCGACACCAG   353 Target Full Sequence	0.0	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
JA894865.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   ||*|||||||||||||||||| targets:81   CUUGGUGUCGAUCGACACCAG   101 Target Full Sequence	1.0	Sequence 182 from Patent WO2011067745	NA	coding protein	psRNATarget
DQ069810.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   ||*|||||||||||||||||* targets:208   CUUGGUGUCGAUCGACACCAU   228 Target Full Sequence	2.0	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183308.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   |*|*||||||||||||||||* targets:1239   CAGAGUGUCGAUCGACACCAU   1259 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183309.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   |*|*||||||||||||||||* targets:1331   CAGAGUGUCGAUCGACACCAU   1351 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069800.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   *||||||||||*||||||||* targets:1962   GUGGGUGUCGAACGACACCAC   1982 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g10070) mRNA, complete cds	NA	coding protein	psRNATarget
AY227631.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   **|*||||||||||||||=|| targets:353   GAGAGUGUCGAUCGACACUAG   373 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11135/T13H18.19) mRNA, complete cds	NA	coding protein	psRNATarget
EF183308.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   |**|||*|||||||||||||* targets:1260   CAUGGUAUCGAUCGACACCAC   1280 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183309.1	ncRNA:21   GACCCACAGCUAGCUGUGGUC   1   |**|||*|||||||||||||* targets:1352   CAUGGUAUCGAUCGACACCAC   1372 Target Full Sequence	3.0	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget