ncRNA ID | novel_bna_miR580 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC9:22297019-22297163 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604 |
Length | 27 |
Mature sequence(if miRNA) | 119 - AGGUUGCUUUGAGAAUGAAGAAGUAUC - 145 |
Stem-loop(if miRNA) |
---AGG      -           AAGU   A        -UU  G     G G    UUUUUGGA        UU       UUGCUU UGAGAAUGAAG    AUC UCCUCUGC   AG UGCUU A UAGG        UAUAUUUU  G       |||||| |||||||||||    ||| ||||||||   || ||||| | ||||        ||||||||       GAUGAG ACUCUUAUUUU    UAG AGGGGAUG   UU ACGAG U GUUC        AUAUGGGG  G GAUUUA      U           --GU   -        UUC  G     G -    UGUCAAUG        UA |
Stem-loop sequence | AGGUUGCUUUGAGAAUGAAGAAGUAUCAUCCUCUGCUUAGGUGCUUGAGUAGGUUUUUGGAUAUAUUUUUUGGAUGGGGUAUAGUAACUGUCUUGUGGAGCAGUUCUUGUAGGGGAGAUUGUUUUAUUCUCAUGAGUAGAUUUAG |