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BaseInfo

ncRNA ID novel_bna_miR577
Species Brassica napus
Class miRNA
Genome position ChrC1:1283573-1283642 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495;SRR1363496
Length 24
Mature sequence(if miRNA) 1 - AACUAAAAAAAGCUAAGAACCGGU - 24
Stem-loop(if miRNA) --           G                   UA
  AACUAAAAAAA CUAAGAACCGGUUCUUAAA  A
  ||||||||||| |||||||||||||||||||  G
  UUGAUUUUUUU GAUUCUUGGCCAAGAAUUU  G
AA           -                   CA
Stem-loop sequence AACUAAAAAAAGCUAAGAACCGGUUCUUAAAUAAGGACUUUAAGAACCGGUUCUUAGUUUUUUUAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013811649.1
ncRNA:24   UGGCCAAGA-AUCGAAAAAAAUCAA   1
  *|=*|||||-|||||||||||||||
targets:1477   UCUUGUUCUGUAGCUUUUUUUAGUU   1501

2.0 PREDICTED: Brassica napus uncharacterized LOC106371567 (LOC106371567), mRNA uncharacterized LOC106371567(LOC106371567) coding protein psRNATarget