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BaseInfo

ncRNA ID novel_bna_miR571
Species Brassica napus
Class miRNA
Genome position ChrC7:4827863-4827968 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604;SRR537612;SRR537657;SRR537857;SRR538067
Length 21
Mature sequence(if miRNA) 86 - AGCGGAAUAUAAGAACAUGUC - 106
Stem-loop(if miRNA) --AG              A          C                      C
    CGGAAUAUAAGAAC UGUCUCUUAA UUUUAACUAAAAAAGCUAAGAA C
    |||||||||||||| |||||||||| ||||||||||||||||||||||
    GCCUUAUAUUCUUG GCAGAGAAUU AAAAUUGAUUUUUUCGAUUCUU G
AAUG              G          A                      G
Stem-loop sequence AGCGGAAUAUAAGAACAUGUCUCUUAACUUUUAACUAAAAAAGCUAAGAACCGGUUCUUAGCUUUUUUAGUUAAAAAUUAAGAGACGGGUUCUUAUAUUCCGGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013810588.1
ncRNA:21   CUGUACAAGAAUAUAAGGCGA   1
  |||=*|||||||||||||||*
targets:1251   GACGAGUUCUUAUAUUCCGCC   1271

3.0 PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA putative auxin efflux carrier component 8(LOC106370582) coding protein psRNATarget