ncRNA ID | novel_bna_miR571 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC7:4827863-4827968 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537612;SRR537657;SRR537857;SRR538067 |
Length | 21 |
Mature sequence(if miRNA) | 86 - AGCGGAAUAUAAGAACAUGUC - 106 |
Stem-loop(if miRNA) |
--AG              A          C                      C     CGGAAUAUAAGAAC UGUCUCUUAA UUUUAACUAAAAAAGCUAAGAA C     |||||||||||||| |||||||||| ||||||||||||||||||||||     GCCUUAUAUUCUUG GCAGAGAAUU AAAAUUGAUUUUUUCGAUUCUU G AAUG              G          A                      G |
Stem-loop sequence | AGCGGAAUAUAAGAACAUGUCUCUUAACUUUUAACUAAAAAAGCUAAGAACCGGUUCUUAGCUUUUUUAGUUAAAAAUUAAGAGACGGGUUCUUAUAUUCCGGUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013810588.1 |
|
3.0 | PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA | putative auxin efflux carrier component 8(LOC106370582) | coding protein | psRNATarget |