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BaseInfo

ncRNA ID	novel_bna_miR566
Species	Brassica napus
Class	miRNA
Genome position	ChrC5:35159516-35159649 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537604
Length	22
Mature sequence(if miRNA)	113 - UAGCGGAAUAUAAGAACUCAUC - 134
Stem-loop(if miRNA)	--           A    -  CA   C                  -         C U        AC   UAGCGGAAUAU AGAA CU  UCU UUAACUUUUAACUAAAAA GCUAAGAAC G UUCUUAAA  U   ||||||||||| |||| ||  ||| |||||||||||||||||| ||||||||| | ||||||||  C   AUCGUCUUAUA UCUU GA  AGA AAUUGAAAAUUGAUUUUU CGAUUCUUG C GAGAAUUU  U GA           A    A  -C   A                  U         A C        AU
Stem-loop sequence	UAGCGGAAUAUAAGAACUCAUCUCUUAACUUUUAACUAAAAAGCUAAGAACCGUUUCUUAAAACUCUUAUUUAAGAGCCAGUUCUUAGCUUUUUUAGUUAAAAGUUAAAAGACAGAUUCUAAUAUUCUGCUAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013810588.1	ncRNA:22   CUACUCAAGAAUAUAAGGCGAU   1   ||*|||||||||||||||||*| targets:1251   GACGAGUUCUUAUAUUCCGCCA   1272 Target Full Sequence	1.5	PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA	putative auxin efflux carrier component 8(LOC106370582)	coding protein	psRNATarget
XM_013830748.1	ncRNA:22   CUACUCAAGAAUAUAAGGCGAU   1   ||*|=||||||||||||||*|| targets:24   GACGGGUUCUUAUAUUCCGAUA   45 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830747.1	ncRNA:22   CUACUCAAGAAUAUAAGGCGAU   1   ||*|=||||||||||||||*|| targets:24   GACGGGUUCUUAUAUUCCGAUA   45 Target Full Sequence	2.5	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013888671.1	ncRNA:22   CUACUCAAGAAUAUAAGGCGAU   1   **|||*|||||||||||||=|| targets:1256   AUUGAUUUCUUAUAUUCCGUUA   1277 Target Full Sequence	2.5	PREDICTED: Brassica napus flavonol synthase/flavanone 3-hydroxylase-like (LOC106446861), mRNA	flavonol synthase/flavanone 3-hydroxylase-like(LOC106446861)	coding protein	psRNATarget