ncRNA ID | novel_bna_miR564 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:20617260-20617372 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537604;SRR537612 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UACGUAGCGACCGAGCUUGGCAUC - 24 |
Stem-loop(if miRNA) |
--     A     C       -  -AUC                           GG   UACGU GCGAC GAGCUUG GC    GCUCGGUCGCUAUGUAGCGACCGAGCG  A   ||||| ||||| ||||||| ||    |||||||||||||||||||||||||||  C   AUGCA CGCUG CUCGAGC CG    CGAGCCAGCGAUGCAUCGCUGGCUCGU  G CG     A     C       U  GUUU                           GA |
Stem-loop sequence | UACGUAGCGACCGAGCUUGGCAUCGCUCGGUCGCUAUGUAGCGACCGAGCGGGACGAGUGCUCGGUCGCUACGUAGCGACCGAGCUUUGGCUCGAGCUCCGUCGCAACGUAGC |