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BaseInfo

ncRNA ID novel_bna_miR561
Species Brassica napus
Class miRNA
Genome position ChrC3:29940722-29940860 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537604
Length 27
Mature sequence(if miRNA) 1 - UGUAUAUGUGUAUGUAGUUGUGGGAUC - 27
Stem-loop(if miRNA) --                        A   A                CC   C                U
  UGUAUAUGUGUAUGUAGUUGUGGG UCC CUAAAUAGUGUAGAAC  CUA CCAAAGGUUCUAAAAA U
  |||||||||||||||||||||||| ||| ||||||||||||||||  ||| ||||||||||||||||
  ACAUAUACACAUACAUCAACACUC AGG GAUUUAUCACAUCUUG  GAU GGUUUCCAAGAUUUUU U
UA                        -   C                AA   A                G
Stem-loop sequence UGUAUAUGUGUAUGUAGUUGUGGGAUCCACUAAAUAGUGUAGAACCCCUACCCAAAGGUUCUAAAAAUUUGUUUUUAGAACCUUUGGAUAGAAGUUCUACACUAUUUAGCGGACUCACAACUACAUACACAUAUACAAU